SGABU computational platform for multiscale modeling: Bridging the gap between education and research

Geroski, Tijana; Gkaintes, Orestis; Vulović, Aleksandra; Ukaj, Niketa; Barrasa-Fano, Jorge; Perez-Boerema, Fernando; Milićević, Bogdan; Atanasijević, Aleksandar; Živković, Jelena; Živić, Andreja; Roumpi, Maria; Exarchos, Themis; Hellmich, Christian; Scheiner, Stefan; Van Oosterwyck, Hans; Jakovljević, Djordje; Ivanović, Miloš; Filipović, Nenad

doi:10.1016/j.cmpb.2023.107935

Record link:

http://hdl.handle.net/20.500.12708/190971

Title:

SGABU computational platform for multiscale modeling: Bridging the gap between education and research

Citation:

Geroski, T., Gkaintes, O., Vulović, A., Ukaj, N., Barrasa-Fano, J., Perez-Boerema, F., Milićević, B., Atanasijević, A., Živković, J., Živić, A., Roumpi, M., Exarchos, T., Hellmich, C., Scheiner, S., Van Oosterwyck, H., Jakovljević, D., Ivanović, M., & Filipović, N. (2024). SGABU computational platform for multiscale modeling: Bridging the gap between education and research. Computer Methods and Programs in Biomedicine, 243, Article 107935. https://doi.org/10.1016/j.cmpb.2023.107935

Publisher DOI:

10.1016/j.cmpb.2023.107935

Publication Type:

Article - Original Research Article

Language:

English

Organisational Unit:

E202-01 - Forschungsbereich Festigkeitslehre und Biomechanik

Journal:

Computer Methods and Programs in Biomedicine

ISSN:

0169-2607

Date (published):

Jan-2024

Number of Pages:

Publisher:

ELSEVIER IRELAND LTD

Peer reviewed:

Yes

Keywords:

Computer Simulation; Language; Workflow; Computational Biology; Computational platform; Multiscale modeling; Open science; User-friendly interface; Software; User-Computer Interface

Abstract:

In accordance with the latest aspirations in the field of bioengineering, there is a need to create a web accessible, but powerful cloud computational platform that combines datasets and multiscale models related to bone modeling, cancer, cardiovascular diseases and tissue engineering. The SGABU platform may become a powerful information system for research and education that can integrate data, extract information, and facilitate knowledge exchange with the goal of creating and developing appropriate computing pipelines to provide accurate and comprehensive biological information from the molecular to organ level.

Project title:

Increasing scientific, technological and innovation capacity of Serbia as a Widening country in the domain of multiscale modelling and medical informatics in biomedical engineering: 952603 (European Commission)

Project (external):

Ministry of Science, Technological Development and Innovation of the Republic of Serbia

Project ID:

451-03-47/2023-01/200107

Research Areas:

Modeling and Simulation: 60%
Computational Materials Science: 40%

Science Branch:

2060 - Medizintechnik: 50%
1020 - Informatik: 50%

License:

CC BY-NC 4.0